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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11746266 chr5:123131879 A/G LOC100130331 chr1:238025475-238091617:+ 0.38 6.83 3.41E-11 Box Plot
BLCA rs11746266 chr5:123131879 A/G POU2F1 chr1:167190066-167396582:+ 0.38 6.61 1.33E-10 Box Plot
BLCA rs11746266 chr5:123131879 A/G RPL19P12 chr7:102781796-102782386:- 0.39 7.23 2.66E-12 Box Plot
BLCA rs11752946 chr6:26560364 C/A ZNF322B chr9:99957633-99961910:- 0.44 7.65 1.59E-13 Box Plot
BLCA rs11754138 chr6:26526941 G/C ZNF322B chr9:99957633-99961910:- 0.45 7.96 2.01E-14 Box Plot
BLCA rs11756120 chr6:26529808 G/C ZNF322B chr9:99957633-99961910:- 0.45 7.95 2.07E-14 Box Plot
BLCA rs11757148 chr6:81367313 C/T NUS1 chr6:117996665-118031803:+ -0.6 -5.96 5.63E-9 Box Plot
BLCA rs11774465 chr8:1460662 C/G ATP5EP2 chr13:28519343-28519727:+ 0.37 6.93 1.75E-11 Box Plot
BLCA rs11774465 chr8:1460662 C/G FLJ44635 chrX:71364034-71381599:+ 0.34 6.16 1.84E-9 Box Plot
BLCA rs11774465 chr8:1460662 C/G LOC100130932 chr19:14599758-14600688:+ 0.35 6.46 3.14E-10 Box Plot
BLCA rs11774465 chr8:1460662 C/G POU2F1 chr1:167190066-167396582:+ 0.41 7 1.14E-11 Box Plot
BLCA rs11774465 chr8:1460662 C/G RPL13AP3 chr14:56232895-56234435:+ 0.33 6.63 1.17E-10 Box Plot
BLCA rs11774465 chr8:1460662 C/G RPL19P12 chr7:102781796-102782386:- 0.38 6.91 2.06E-11 Box Plot
BLCA rs11775437 chr8:139675584 C/T CT47A9 chrX:120077415-120080737:- -0.2 -6.25 1.11E-9 Box Plot
BLCA rs11779410 chr8:2872533 A/T FBXO25 chr8:356428-427967:+ -0.67 -6.23 1.24E-9 Box Plot